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Fungi

FUNGI

FUNGI. Fungising. fungus; from the Greek sphongis (sponge)are nonphotosynthetic and thus must absorb nutrients from organic matter formed by other organisms. The great majority of fungi obtain their food from dead organic matter and hence are known as saprophytes; a relatively small percentage derive their food from other living organisms and are known as parasites. Fungi may be unicellular (yeasts) or multicellular (mushrooms) and their cell walls usually contain chitin or cellulose and bglucan. They may produce sexually or asexually by means of spores that are roughly comparable with the seeds of higher plants.

The fungal kingdom offers enormous biodiversity with over seventy thousand known species and an estimated 1.5 million species. According to molecular evidence (16S-like ribosome RNA sequences), the fungi may have originated from protozoan ancestors before the kingdoms Animalia and Plantae split; there is strong evidence that Fungi are closer to Animalia than Plantae (Hawksworth et al.). Fungi are associated with some of the earliest remains of land plants. Some scientists believe that lichens (a stable self-supporting association of a fungus and an alga) might be transmigrants, the earliest colonizers of land.

Fungi have contributed to the shaping of humankind's welfare since the beginning of civilization. Fungi are recognized as both beneficial and harmful in their relationship to humans although this role is predominantly beneficial. They are responsible for a major portion of food deterioration in developing countries; however, the preservative effects of fermentation of foods and beverages with fungi are well-known benefits, including organic acids, alcohol, antibiotics, pigments, vitamins, growth regulators, immunomodulating agents, and enzymes. Finally, various types of edible mushrooms are consumed as an important part of human diets in many countries.

Fungi and Food Processing

Fungi used in food processing have been an integral part of the human diet since the beginning of civilization. In such foods, fungi are the agents responsible for imparting special flavors, textures, odors, or consistencies to food products. Fungi such as Aspergillus spp., Rhizopus spp., Penicillium spp., Neurospora spp., Cladosporium spp., and Mucor spp., as well as yeasts and many others have long been used to process a number of food products from soybeans to peanuts, rice, gram, maize, cassava, taro, and cacao beans.

Fungal enzymes. Food formulation using enzymes derived from fungi has undergone a rebirth in recent years. Enzyme suppliers have improved their ability to supply single-activity enzymes that do not have undesirable side activities (see Table 1 for a list of commercial fungal enzymes and their uses). Enzyme products have found increasing application for improving product clarity and yield and in replacing costly physical processes such as heating.

Cheese manufacture. Two general types of cheese are made with fungi as the ripening agents. Roquefort cheese is an example of cheese that is ripened primarily by growth of fungi (Penicillium roquefortii ) throughout the cheese mass. Brie cheese is an example of one type of soft cheese that is ripened by the growth of fungi (Penicillium camemberti ) on the outside of the cheese mass. In both types of cheeses, the fungi grow and release protein and fat-degrading enzymes that soften and ripen the cheese. Roquefort cheese requires about two months to ripen while Brie cheese requires only about one month to ripen.

Baker's yeast. Leavening, a process whereby batter or dough is caused to rise via the production of gas, especially carbon dioxide, was first discovered in Egypt. Today, most of the bread, cakes, cookies, and the like consumed by the public are prepared from leavened batter

List, source, and uses of enzymes derived from fungi for food manufacture
Enzyme Source Use
α -Amylase, amyloglucosidase Aspergillus niger
A. oryzae
Rhizopus spp.
Hydrolysis of starch in production of beer, bread; manufacture of high-fructose syrups
α-Galactosidase Mortierella vinacea Hydrolysis of raffinose to sucrose and galactose during sugar refining
Catalase Aspergillus niger
Penicillium vitale
Remove excess hydrogen peroxide formed during cake baking or that may be added during pasteurization of milk and cheese
Cellulase Aspergillus niger
Trichoderma viride
Improve palatability of low-quality vegetables, accelerate drying of vegetables, alter texture of foods, increase flavor of commercial mushrooms
Hemicellulase Aspergillus niger
Trichoderma viride
Manufacture of instant coffee
Invertase Yeasts
Aspergillus spp.
Increases sweetness in confections; yields soft center in chocolate-covered candies
Lactase Aspergillus niger
A. oryzae
Hydrolysis of lactose in milk products, enabling their use by lactose-intolerant individuals; production of syrups for use as sweetening agents
Lipase Candida spp.
Aspergillus spp.
Mucor spp.
Rhizopus spp.
Used for flavor development in cheese, chocolate crumb, apple wine, and cooking fats; improved whipping properties of egg whites; fish processing
Naringinase Aspergillus niger Reduce bitter flavonone glycoside derivative found in some citrus products
Nuclease Penicillium spp. Flavor enhancers
Pectic Enzymes Aspergillus niger
Penicillium notatum
Botrytis cinerea
Remove turbidity from fresh fruit juices; removal of pectins before concentrating juice; clarifying agent in wine
Protease Aspergillus spp. Mucor pusillus Meat tenderizer; remove bitter flavors, replace rennin in cheese manufacture, chill-proofing of beer; reduce elasticity of glutin proteins in bread
Rennet Mucor spp. Milk coagulation in cheese manufacture
Tannase Aspergillus niger Treat insoluable material that forms during manufacture of instant tea
SOURCE: Adapted from: Beuchat (1987) and Moore-Landecker (1995)

or dough. Most cakes and cookies are leavened chemically (by using baking powder) while most bread is leavened by yeasts (such as Saccharomyces cerevisiae ). Yeasts develop and reproduce by producing buds on mother cells that subsequently enlarge and produce more buds. During growth, carbohydrates in the dough are metabolized to carbon dioxide that is trapped in the dough in the form of bubbles. During the leavening process, alcohol may accumulate in the dough to as high as 0.5 percent. The alcohol is driven off during baking and helps give the bread a pleasant aroma.

Edible Mushrooms

Mushrooms have a long history of human consumption. Traces of puffball fungi have been found in Stone Age settlements. Over 4,500 years ago in ancient Egypt only pharaohs were permitted to eat mushrooms, which they believed were "sons of the gods" sent down to earth on lightning bolts announced by claps of thunder. The legend that mushrooms may have originated from thunder and lightning also existed among people of other ethnic groups. In Roman folklore, some fungi were believed to spring from the ground in places struck by a thunderbolt. In the Hindu tradition, there was a god named Soma that manifested himself to the priests in the form of hallucinogenic fluids. Some scientists believe that Soma was the fly mushroom, Amanita muscaria. A similar legend may have existed among the inhabitants of the highlands of Guatemala and Mexico, where even today the people refer to A. muscaria by a common name meaning thunderbolt (Lowy).

Cultivated species. The cultivation of edible mushrooms worldwide reached 6.16 million metric tons in 1997, up from 1.26 million tons in 1981 (Table 2; Chang). This represents a 12 percent annual increase. Six mushroom genera accounted for 87 percent of the total mushroom supply (Table 2). These were Agaricus (31.8%), Lentinula (25.4%), Pleurotus (14.2%), Auricularia (7.9%), Flammulina (4.6%), and Volvariella (3%). China produced 3.92 million tons of mushrooms in 1997, or 63.6 percent of the total world output. The major mushroom of commerce in China is L. edodes, which accounts for 35 percent of the total output for that country. China currently produces 88 percent of the total world production of L. edodes.

Agaricus bisporus (button mushroom). The cultivation of the button mushroom originated in the Paris region in France. Melon growers in this region discovered how mushrooms could be grown and started cultivating them in 1650. By the mid 1700s it was discovered that A. bisporus could grow without light, and that very favorable conditions for growing mushrooms prevailed in subterranean tunnels and caves. As a result of this discovery,

World production of cultivated edible mushrooms in 1981, 1990, and 1997
  1981 1990 1997
Species Fresh Wt (x 1,000 t) % Fresh Wt (x 1,000 t) % Fresh Wt (x 1,000 t) %
Agaricus bisporus 900.0 71.6 1,424.0 37.8 1,955.9 31.8
Lentinula edodes 180.0 14.3 393.0 10.4 1,564.4 25.4
Pleurotus spp. 35.0 2.8 900.0 23.9 875.6 14.2
Auricularia spp. 10.0 0.8 400.0 10.6 485.3 7.9
Volvariella volvacea 54.0 4.3 207.0 5.5 180.8 3.0
Flammulina velutipes 60.0 4.8 143.0 3.8 284.7 3.0
Tremella spp. - - 105.0 2.8 130.5 2.1
Hypsizygus spp. - - 22.6 0.6 74.2 1.2
Pholiota spp. 17.0 1.3 22.0 0.6 55.5 0.9
Grifola frondosa - - 7.0 0.2 33.1 0.5
Others 1.2 0.1 139.4 3.7 518.4 8.4
Total 1,257.2 100.0 3,763.0 100.0 6,158.4 100.0
SOURCE: Chang, 1999

successful culture was undertaken inside the numerous caves that were excavated for building stones and for gypsum. The caves presented, from a climatic point of view, several advantages over the previous growing conditions in open air. Factors such as temperature and relative humidity were much more constant in caves compared with aboveground conditions.

From France, mushroom cultivation spread to other parts of the world. The business grew and soon spread to England and other countries. By 1825, the first mushroom crops were being produced in caves in Holland. In 1865, mushroom culture entered the United States via England and the first mushrooms were grown on a small scale on Long Island, New York; by 1870 the industry had begun to develop.

The button mushroom is produced commercially on a selective substrate prepared by composting mixtures of wheat straw, hay, corncobs, horse manure, or combinations thereof. The finished compost should have a nitrogen (N) content of 22.5 percent, and to reach such a level, nitrogen-rich supplements must be added. Inorganic nitrogen supplements can be added but only to provide part of the necessary amount. Organic sources of nitrogren include oilseed meal, brewers' grain, malt sprouts, and poultry manure.

Once the compost has been prepared, it is seeded with mushroom spawn that is prepared from a mother culture maintained by a spawn laboratory. Spawn is prepared by inoculating a pure culture of the mushroom onto steam-sterilized grain, usually rye or millet. Approximately one liter (500 g) of spawn is used to seed 0.5 m2 of production surface that is contained in trays or beds inside environment-controlled production houses. Spawn run (vegetative growth of the mycelium) lasts ten to fourteen days, then a layer of neutralized peat moss (casing) is placed on top of the colonized compost to stimulate production of mushrooms. Approximately ten to fourteen days after casing, mushrooms are ready for harvest.

Lentinula edodes (shiitake). Production of shiitake worldwide increased more than sevenfold in the fourteen-year period from 1983 (207,000 t) to 1997 (1,573,000 t; Chang). Most of this increase occurred in China, where more than ten million part-and full-time farmers cultivate shiitake. Shiitake is widely consumed in China, yet one-third of production is exported. In 1997, China produced approximately 88 percent of the total world output (Chang). In the United States, production of shiitake is a relatively new enterprise, having begun only in the late 1970s. In 1990, the United States produced 1,123 tons of shiitake and by 1999 production reached 3,941 tons, a 3.5-fold increase (USDA). This increase in production was due, in part, to increased production efficiency and to increasing consumer demand. Farmers have learned to provide the specialized management this crop requires, thereby reducing production costs. The amount of controlled-environment production surface devoted to growing shiitake on synthetic logs has increased 2.9 fold from 1990 to 1999 (74,200 m2 to 212,400 m2, respectively).

Sawdust is the most popular basal ingredient used in synthetic formulations of substrate for producing shiitake in the United States, but other basal ingredients may include straw, corncobs, or both. Starch-based supplements (2060 percent dry weight) such as wheat bran, rice bran, millet, rye, and maize may be added to the mix. These supplements serve as nutrients to provide a more optimal growth medium (Royse).

Pleurotus spp. (oyster mushroom). Oyster mushroom production increased at a rapid rate worldwide during the 1980s and then decreased slightly during the 1990s (Table 2). From 1986 to 1997, oyster mushroom production increased from 169,000 tons to 917,000 tons (a 5.4-fold increase). China was responsible for most of the production increase. In the United States, production of oyster mushrooms was 1,647 tons in 2001, up 2 percent from the previous year (USDA).

In the United States, the primary ingredients used for Pleurotus spp. production are chopped wheat straw or cottonseed hulls or mixtures thereof. After completion of pasteurization (140°F [60°C] for one to two hours) the substrate is cooled and spawned with the desired strain. There are several species of oyster mushrooms cultivated, with various colors of fruiting body. In Japan, bottle production of oyster mushrooms is most common. Substrate is filled into bottles, sterilized, and inoculated with Pleurotus spawn. Upon completion of the spawn run, bottle lids are removed and mushrooms emerge from the surface of the substrate. After the mushrooms are harvested they are weighed and packaged for shipment to market.

Auricularia spp. (wood ear mushroom). Total production of Auricularia spp. in 1997 exceeded 485,000 metric tons (fresh weight; Table 2). This value is an increase of 366,000 tons or fourfold over 1986 levels (Chang). Auricularia spp. production now represents about 8 percent of the total cultivated mushroom supply worldwide.

Auricularia auricula and A. polytricha commonly are produced on a synthetic medium consisting of sawdust, cottonseed hulls, bran, and other cereal grains or on natural logs of broadleaf trees. For synthetic medium production of Auricularias, the substrate may be composted for up to five days or used directly after mixing. The medium is filled into heat-resistant polypropylene bags and sterilized (substrate temperature 240°F [121°C]) for sixty minutes. After the substrate has cooled, it is inoculated with either grain or sawdust spawn. Light intensity of more than 500 lux during the spawn run may result in premature formation of primordia. Temperature, light intensity, and relative humidity all interact to influence the nature and quality of the mushrooms.

Flammulina velutipes (enokitake) . Worldwide production of F. velutipes has increased from about 100,000 metric tons in 1986 to about 285,000 tons in 1997. Japan is the main producer of enokitake. In the United States, enokitake production has increased at an estimated rate of 25 percent or more per year for the last four years. However, only about 60 tons of enokitake were produced in the United States in 2001.

Production of most enokitake in Japan is based on synthetic substrate contained in polypropylene bottles. Substrates (primarily sawdust and rice bran; 4:1 ratio) are mechanically mixed and filled into heat-resistant bottles with a capacity of 800 to 1,000 ml. Sawdust primarily from Cryptomeria japonica, Chamaecyparis obtusa, or aged (nine to twelve months) Pinus spp. appears to offer the best yields. In the United States, a sterilized, bran-supplemented medium, consisting primarily of corncobs, serves as the primary medium. When the substrate is fully colonized, the original inoculum is removed mechanically from the surface of the substrate and the bottles may be placed upside down for a few days.

To further improve quality during fruiting, temperatures are lowered to 37° to 46°F (3 to 8°C) until harvest. As the mushrooms begin to elongate above the lip of the bottle, a plastic collar is placed around the neck and secured with a Velcro® strip. This collar serves to hold the mushrooms in place so that they are long and straight. When the mushrooms are thirteen to fourteen cm long, the collars are removed and the mushrooms are pulled as a bunch from the substrate. The mushrooms then are vacuum packed and placed into boxes for shipment to market.

Grifola frondosa (maitake). Japan is the major producer and consumer of maitake. Commercial production of maitake in Japan began in 1981 (325 t) and by 1997 reached 32,000 tons (a 98-fold increase). Maitake is produced primarily in the Japanese provinces of Niigata, Nagano, Gunnma, and Shizuoka. Other countries, such as the United States, began maitake production in the early 1990s. Maitake production in the United States in 2001 was estimated at about 84 tons.

Most maitake is marketed as food. However, maitake has been shown to have both antitumor and antiviral properties. Powdered fruit bodies are used in the production of many health foods such as maitake tea, whole powder, granules, drinks, and tablets. Maitake also is believed to lower blood pressure, reduce cholesterol, and reduce the symptoms of chronic fatigue syndrome.

Commercial production of most G. frondosa is on synthetic substrate contained in polypropylene bottles or bags. A common substrate used for production is hardwood sawdust supplemented with rice bran or wheat bran in a 5:1 ratio, respectively. Other formulas include hardwood sawdust (70 percent based on oven dry weight basis) supplemented with white millet (20 percent) and wheat bran (10 percent). Some growers may add soil to the mix to stimulate fruit body formation. For production in bags, the moistened substrate is filled into micro-filtered polypropylene bags and sterilized to kill unwanted competitive microorganisms. After cooling (sixteen to twenty hours), the substrate is inoculated and the bags are heat-sealed and shaken to uniformly distribute the spawn throughout the substrate. Spawn run lasts about thirty to fifty days depending on strain and substrate formulation.

Volvariella volvacea (straw mushroom). Cultivation of V. volvaceae is believed to have begun in China as early as 1822. In the 1930s, straw mushroom cultivation began in the Philippines, Malaysia, and other Southeast Asian countries. Production of the straw mushroom increased from 54,000 tons in 1981 to about 181,000 tons in 1997 (about 3 percent of the total mushroom supply).

Many agricultural by-products and waste materials have been used to produce the straw mushroom. These include paddy straw, water hyacinth, oil palm bunch, oil palm pericarp waste, banana leaves and sawdust, cotton waste, and sugarcane waste. Volvariella is well suited for cultivation in the tropics because of its requirement for higher production temperatures. In addition, the mushroom can be grown on nonpasteurized substrate, which is more desirable for low-input agricultural practices.

In recent years, cotton wastes (discarded after sorting in textile mills) have become popular as substrates for straw mushroom production. Cotton waste gives higher and more stable biological efficiencies (30 to 45 percent), earlier fructification (four days after spawning) and harvesting (first nine days after spawning) than that obtained using straw as a substratum. Semi-industrialization of paddy straw cultivation on cotton wastes has occurred in Hong Kong, Taiwan, and Indonesia as a result of the introduction of this method.

Wild mushrooms. In many developing countries, the collection and sale of wild edible mushrooms has become an important source of income for many people in remote forested regions. Despite a relatively short growing season, wild mushrooms provide many families with 50 to 100 percent of their income. World trade in wild, edible mushrooms is estimated at more than $7 billion annually (Arora). The global trade in matsutake (Tricholoma matsutake ), the most expensive wild mushrooms after truffles, is estimated at $3 to $5 billion. Matsutake may sell for as much as $200 apiece in Tokyo markets. The King Bolete (Boletus edulis ; also known as porcini, cepe, borovik, etc.) is the most popular wild mushroom of Europe. These may be served fresh in some upscale restaurants. Dried boletes are famous for their concentrated flavor and choice aroma and are available year round from almost anywhere in the world. Other wild mushrooms available on world markets include chanterelles (Cantharellus cibarius ), morels (Morchella spp.), hedgehog mushrooms (Hydnum repandum ), lobster mushrooms (Hypomyces lactifluorum ), candy caps (Lactarius fragilis ), and cauliflower mushrooms (Sparassis crispa ).

WARNING: Collecting and ingesting wild mushrooms without the presence of an expert to correctly identify specimens can be very dangerous and should be discouraged since there are several deadly mushrooms that look like edible wild ones.

Mycotoxins

Mycotoxins are chemical compounds produced by fungi growing on organic substances such as corn, cottonseed, or peanuts that, when ingested, have some undesirable effect on humans or on an animal consuming them. Adverse effects can range from vomiting to weight loss, various types of tumors, and in some cases, death. Over one hundred toxic compounds produced by fungi have been identified, and about forty-five of these occur in grain crops. Some mycotoxins are rare in occurrence while others such as aflatoxin are common in some years. The seriousness of the mycotoxin problem varies with the year, the crop being grown, and the intended use of the crop product. Most mycotoxins affect the blood, kidneys, skin, or central nervous system, and some may cause cancer.

The genera of fungi of greatest importance to humans with respect to natural poisoning outbreaks are Aspergillus, Penicillium, and Fusarium. The Aspergillus flavus group produces aflatoxins (at least eighteen types known) that are considered the most important from the viewpoint of a direct hazard to human health. Aspergillus flavus is a common fungus that is found in soil, air, and decaying plant residues. Infection by A. flavus and subsequent aflatoxin production can occur in the field, in transit, or in storage. Most reports indicate that infection occurs in the field, while aflatoxin production can occur whenever the product is exposed to favorable conditions, either in the field or in storage.

Control of aflatoxin includes prevention of fungal growth, removal of toxins, and inactivation of toxin. Most control efforts have been directed toward control of aflatoxins in peanuts and corn. Hand picking, electronic sorting, and air classification accomplish control of aflatoxin in processed peanut products. Removal of shriveled, rancid, or discolored kernels has proven the most practical way of limiting aflatoxin contamination in peanuts.

BIBLIOGRAPHY

Arora, D. "The Global Mushroom Trade." California Wild 52, no. 4 (fall 1999):1617.

Beuchat, Larry R. Food and Beverage Mycology. 2d ed. New York: Van Nostrand Reinhold, 1987.

Chang, S. T. "World Production of Cultivated Edible and Medicinal Mushrooms in 1997 with Emphasis on Lentinus edodes (Berk.) Sing. in China." International Journal of Medicinal Mushrooms 1 (1999):273282.

Findlay, W. P. K. Fungi: Folklore, Fiction, and Fact. Eureka, Calif.: Mad River Press, 1982.

Fine, Gary Alan. Morel Tales: The Culture of Mushrooming. Cambridge: Harvard University Press, 1998.

Friedman, Sara Ann. Celebrating the Wild Mushroom. New York: Dodd, Mead, 1986.

Hawksworth, D. L., P. M. Kirk, B. C. Sutton, and D. N. Pegler. Ainsworth and Bisby's Dictionary of the Fungi. Wallingford, U.K.: CAB International, 1995.

Lowy, B. "Amanita muscaria and the Thunderbolt Legend in Guatemala and Mexico." Mycologia 66 (1974): 188190.

Moore-Landecker, Elizabeth M. Fundamentals of the Fungi. 4th ed. Upper Saddle River, N.J.: Simon & Schuster, 1996.

Royse, Daniel J. "Specialty Mushrooms and Their Cultivation." Horticultural Reviews 19 (1997): 5997.

United States Department of Agriculture. Mushrooms. Washington, D.C.: National Agricultural Statistics Service, Agricultural Statistics Board, 2001.

Wasson, R. Gordon. Soma: Divine Mushroom of Immortality. New York: Harcourt Brace Jovanovich, 1968.

Daniel J. Royse


Mushroom Collectors

The consumption of wild mushrooms has a lengthy history, dating back well over two millennia and extending throughout the world. For over two hundred years, mushrooms have been a cultivated crop as well. Despite somewhat negative images of mushrooms in the popular imagination and despite the possibility of real danger in their consumption, they have long been valued for their culinary and psychedelic properties. In 300 b.c. Theophrastus recorded that mushrooms were valued as food and for trade. Pliny, Juvenal, Martial, and Cicero all considered mushrooms to be great delicacies, and the Roman emperor Claudius was allegedly poisoned by a plate of mushrooms. Mushrooms are also mentioned in the Hindu Rig Veda and were eaten on the Indian subcontinent. Mushrooms were probably consumed for food and for their psychedelic properties in Mesoamerica, Siberia, and Scandinavia. Some suggest that the biblical "manna from heaven" was a fungus. By the eighteenth-century reign of Louis XIV, mushrooms were cultivated in caves near Paris. During the nineteenth century mushrooming became a popular leisure pursuit in Europe and America, and by the end of the century mushroom societies were formed.

One estimate placed the number of mushroomers in the United States at thirty million in the early 1980s. A survey conducted at the same time found that 22 percent of Americans collect wild mushrooms, and 15 percent consume mushrooms they find. In the nations of eastern, central, and southern Europe with stronger mushroom cultures, these figures would likely be higher. Mushroom societies are found in every region of the United States, as well as Canada and Europe. In the United States, mushroom societies were founded in Boston and Minneapolis in the late nineteenth century. The North American Mycological Association, covering the United States and Canada, has approximately 2,000 members. These clubs organize talks, dinners, sharing of advice, and forays to mushroom collecting sites.

Novices worry about the toxic qualities of wild mushrooms. Despite this, the number of mushroom fatalities, at least in the United States, is very low. In some years, there are no fatalities although illnesses or hospitalizations might occur as a result of the misidentification of mushrooms, the contamination of otherwise edible specimens, or allergic reactions. Among the edible wild mushrooms that are most widely collected in the United States and Europe are morels, chanterelles, puffballs, boletes, and coral mushrooms. While the collection of wild mushrooms has increased in the past decades, the hobby is limited, and the greatest growth in "wild mushrooms" is likely to occur when these foods become cultivated and therefore perceived as safe to consume.

Gary Alan Fine


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Fungi

Fungi

Fungi are eukaryotic organisms distinct from plants and animals and members of several other smaller kingdoms. Common fungi include mushrooms, conks, corals, jellies, puffballs, stinkhorns, morels, cups, truffles, lichens, yeasts, rusts, smuts, bread molds, mildews, and molds on bathroom tiles.

In 1959, R. H. Whittaker introduced a five-kingdom taxonomy that granted fungi equal status with plants and animals. The five-kingdom system has been supplanted by a multiple-kingdom classification, and species traditionally treated as fungi are now distributed across several kingdoms. Those believed to form a monophyletic lineage are assigned to kingdom Eumycota (often called kingdom Fungi). Mycology, the science devoted to fungi, still covers all traditional fungi.

Characteristics of Fungi

The Eumycota consist of eukaryotic, nonchlorophyllous heterotrophs that absorb nutrients from dead or living organic matter, have cell walls composed of chitin , and store excess energy as glycogen . The kingdom contains four phyla: Chytridiomycota, Zygomycota, Ascomycota, and Basidiomycota. All true fungi have a definite cell wall throughout all developmental stages. Fungal cell walls are composed of chitin, the compound also found in arthropod exoskeletons (for example, lobster shells). Most fungi produce a vegetative mycelium (filamentous thallus) composed of hyphae that branch and extend via tip elongation, although some groups (like yeasts) consist only of individual cells. Hyphae (singular, hypha) are tube-like filaments with either single multinucleate cells (coenocytes) that lack septa (cross-walls) separating nuclei, or many septate cells containing one, two, or more nuclei.

Fungal Nutrition: Saprobes, Parasites, and Mutualists

A fungal thallus may be as small as a single microscopic cell (baker's yeast, Saccharomyces cerevesiae ) or exceedingly large (Armillaria gallica, the several-acre-sized "humungous fungus" reported in 1992 as the world's largest organism). Sporocarp (fruit body, or "mushroom" size) also ranges from microscopic to meters in diameter (Bridgeoporus nobilissimus, an endangered bracket fungus found on noble fir trees).

Not unexpectedly, such a diverse kingdom manifests several different life cycles. Virtually all fungi produce spores. Both asexual and sexual spores may germinate to form vegetative thalli from primary and secondary mycelia. Thalli may be haploid dominant, diploid dominant, or exhibit haplo-diploid alternation of generations. Here it is important not to confuse the chromosomal state of individual nuclei (haploid versus diploid) with the number of nuclei per cell (monokartyotic versus dikaryotic). Fungi are unusual in that they often exhibit dikaryotamy, wherein hyphal cells contain two (usually haploid) nuclei that migrate, multiply, and divide together.

Although superficially similar to plants, fungi are probably more closely related to animals. Like animals, fungi lack chlorophyll and do not photo-synthesize, must obtain nutrients from organic sources, and store energy as glycogen instead of starch. Unlike animals, however, fungi do not engulf, but rather absorb, their nutrients after breaking them down via enzymatic action, earning them the nickname "absorbotrophs."

Fungi absorb their nutrients in three different ways: (1) saprobes decompose dead organic matter; (2) parasites feed on living hosts; and (3) mutualists live in symbiotic unions with other living organisms. Saprophytic fungi, such as edible meadow mushrooms (Agaricus campestris ), shiitake (Lentinula edodes ), and oyster mushrooms (Pleurotus ostreatus ), decompose dead plant and animal tissue by releasing enzymes from hyphal tips, thereby recycling organic materials back into the surrounding environment. Parasitic fungi also use enzymes to break down living tissue, usually sapping the energy of the host and frequently causing its demise.

Lichens and mycorrhizae are two important mutualistic associations. Lichens represent partnerships between a fungus (mycobiont) and one or more algae (phycobiont). Although there are a few basidiolichens, almost all lichen mycobionts are Ascomycota (approximately 20,000 ascolichens described thus far). Mycorrhizae are symbiotic or non to slightly pathogenic fungus-plant unions formed with approximately 85 percent of the vascular plants. Mycorrhizae are identified as ectomycorrhizal, arbuscular mycorrhizal (AM), ericoid, orchid, arbutoid, and monotropoid based on anatomical form and association. Ectomycorrhizal fungi (predominantly basidiomycetes such as boletes, amanitas, and coral fungi) form thick mycelial mantles around rootlets of many trees (oaks, firs, pines, poplars) to which they transport water and minerals from the soil, receiving sugars and other organic nutrients in return. AM fungi (in the Zygomycota order Glomales) form an endo-infection by penetrating rootlets to form coils and vesicles or finely branched arbuscules. The last four mycorrhizal types are specific to individual plant groups.

Ecological and Economic Importance

Fungi have a profound biological and economic impact. As decomposers, plant pathogens, and symbiotic partners, their ability to grow anywhere, on anything, makes them both beneficial and harmful recyclers of carbon and nitrogen. Beneficially, they are used as food (mushrooms, truffles) and in baking and brewing (yeasts). They are being developed to detoxify pollutants (soil fungi), control insects (pathogenic Zygomycota), and regulate plant growth (pathogenic Ascomycota). Detrimentally, rusts, smuts, and molds cost billions of dollars through crop disease and spoilage while forest pathogens such as the honey mushroom (Armillaria ostoyae ) and root-butt rot (Heterobasidion annosum ) similarly threaten the timber industry. Some are toxic when eaten, such as the infamous destroying angel (Amanita phalloides ). Natural LSD, a hallucinogen produced by ergot (Claviceps purpurea ), is associated with medieval hysterical frenzies produced by consumption of infected grain, and the aflatoxin produced by Aspergillus flavus in improperly stored grain is one of the most potent carcinogens yet discovered. As human and animal pathogens, fungi cause infections that range from the vexing (athlete's foot, yeast infections) to life threatening (histoplasmosis). Fortunately, other fungi (such as Penicillium ) have been used to develop modern antibiotics and beneficial immunosuppressants .

Classification

With the introduction of deoxyribonucleic acid (DNA) sequence analyses, previous fungal evolutionary theory is undergoing rapid transformation, not surprising when one considers the extremely fragmentary fungal fossil record. Mycologists generally agree that true fungi (with animals and plants) diverged from the protozoan fungi (for example, slime molds and Oomycota) before fungi and animals diverged from plants. The chytrids separated from the remaining phyla approximately 550 million years ago, followed by splintering of the Zygomycota from the other two phyla, which share septate hyphae and dikaryotic stages in their life cycles. The Ascomycota split from the Basidiomycota approximately 400 million years ago, followed by an increase in fungal diversity throughout the Paleozoic. Most yeasts and "asco-molds" are thought to have evolved in approximately the last 200 million years.

While most plants and vertebrates appear to have been described, most fungi have yet to be discovered or named. The 1995 edition of the Dictionary of Fungi counts 566,360 described species (about 100,000 in the Eumycota) but notes that there may be approximately 1.5 million species of fungi in the world. Elias Fries (17941878), often regarded as the "father of mycology," classified fungi based primarily on spore print color and sporocarp appearance. Friesian-based nomenclature, reflecting similarity of form (phenetic) rather than genetic relationships, is still used in many field guides. Now, however, taxonomists are integrating molecular and morphological characters to develop natural classifications that more adequately reflect evolutionary relationships. Realizing that fungal taxonomy and nomenclature will remain somewhat fluid until new species and data are analyzed and integrated, most mycologists generally accept the classification below.

Chytridiomycota. The fact that chytrids alone among the Eumycota produce motile zoospores explains why their phylum is sometimes assigned with the flagellate oomycetes to kingdom Chromista. Chytrids possess posteriorly uniflagellate spores, mitochondria with flattened cristae, and cell walls composed of glucan and chitin. Among the simplest and smallest fungi, they live as saprobes in water and damp organic-rich habitats, or as parasites on invertebrates, plants, and other fungi. The so-called "frog chytrids" (such as Batrachochytrium dendrobatidis ) are implicated in the current worldwide decline of amphibian species. Other chytrids are host-specific "rumen fungi" (such as Piromyces communis ) that thrive in anaerobic conditions in the guts of herbivores, such as cattle and sheep. There are five orders and about 800 species of chytrids recognized thus far.

Unicellular members of the order Chytridiales lack a mycelial stage and consist of a central body with a few rudimentary appendages (haustoria) that attach to and invade the host tissue. Other chytrids, such as the Blastocladiales, develop true mycelia with sporangia and male/female gametangia that produce uniflagellate zoospores. Chytrid thalli may be either haploid or diploid, and some, like the aquatic chytrid Allomyces, exhibit an isomorphic alternation of generations with similar appearing sexual and asexual zoospores.

Zygomycota. The chytrids and this phylum are assigned the two "bottom" branches of the fungal evolutionary tree. There are more than 1,000 species in two classes (Trichomycetes, Zygomycetes) and ten orders, representing a diverse assemblage of saprobes, soil fungi, obligate insect and fungal parasites, and mycorrhizal formers. Common representatives of the saprobic order Mucorales include the dung-inhabiting "cap-thrower" (Pilobolus ), the black bread mold (Rhizopus stolonifera ), and Phycomyces blakesleeanus, sometimes referred to as the "body in the basement" because of the rapid growth of long, hairlike sporangiophores over a substrate under the right conditions.

Zygomycota are characterized by large, thick-walled, coenocytic zygospores and hyphae with relatively thin walls composed of chitin and chitosan. Both asexual sporangiospores and sexual zygospores germinate into haploid mycelia, with the hyphae functioning as gametangia during the sexual stage. In Rhizopus, for instance, close proximity of two hyphal strands of different mating types chemically triggers each to grow branches toward the other to form septate suspensor cells and gametangia. Eventual fusion produces a diploid zygosporangium that undergoes meiosis to become a thick-walled zygospore with large numbers of haploid nuclei.

Ascomycota. In addition to most lichens and so-called "imperfect fungi," about 33,000 species of unicellular yeasts, green and black molds, powdery mildews, morels, cup fungi, and ascotruffles ("true" truffles) belong to this phylum. The phylum is characterized by ascospores produced within a saclike sporangium called an ascus. Mycelia (more complex than Zygomycota mycelia) are composed of septate hyphae with chitin-glucan hyphal walls. Most species produce specialized fruiting bodies called ascocarps whose details of structure help define different species, classes, or orders. Nonascocarpic representatives (such as unicellular yeasts and mildews that reproduce primarily by budding) do not form mycelia. Both sexual and asexual reproduction are found within this phylum.

Basidiomycota. This phylum, which also features septate hyphae and chitin-glucan cell walls, is characterized by basidiospores borne upon a club-like structure called a basidium. Approximately 22,500 species are assigned to three classes: Basidiomycetes, Teliomycetes, and Ustomycetes. Basidiomycetes include mushrooms, polypores, crusts, corals, clubs, basidiolichens, and jellies, which propel their spores, and "gastromycetes" (or "stomach fungi") that passively release their spores (puffballs, basidiotruffles ["false truffles"], stinkhorns, and birds' nests). Teliomycetes (rusts) and Ustomycetes (smuts) are obligate parasites of insects or plants. Rusts and smuts have exceedingly complex cycles involving up to five separate spore stages and multiple hosts. This ability to produce spores on different hosts in multiple ways presents a significant economic challenge to agriculture.

Oomycota. Oomycetes (kingdom Chromista) are distinguished from true fungi by having glucan-cellulose cell walls that only occasionally incorporate small amounts of chitin. These algae-like fungi occur in aquatic or moist terrestrial habitats as single cells or mycelial mats composed of multinucleate, nonseptate hyphae. Their life cycle generally mirrors that of plants, with a transitory haploid stage. Both resting oospores and motile zoospores are diploid, the latter propelled by two unequal flagella (tinsel type plus whiplash). This phylum contains about 700 species in nine orders, including the generally saprophytic water molds (Saprolegniales) and the pathogenic Peronosporales and Pythiales. Most water molds are saprophytic, but there are a number of parasites that invade plants (white rusts, downy mildews, tobacco blue mold) or fish. Among the economically significant wilts, blights, and pathogens are Phytophthora infestans (responsible for the Irish potato famine in the 1850s), Plasmopara viticola (the causative agent of downy mildew of grapes), and the fish parasite Saprolegnia parasitica, a twenty-first-century threat to salmon migrating through dams in western North America.

see also Alternation of Generations; Kingdom; Mycorrhizae; Plant Pathogens and Pests; Symbiosis

Lorelei L. Norvell

Bibliography

Alexopoulos, C. J., C. W. Mims, and M. Blackwell. Introductory Mycology, 4th ed. New York: John Wiley & Sons, 1996.

Arora, D. Mushrooms Demystified: A Comprehensive Guide to the Fleshy Fungi. Berkeley, CA: Ten Speed Press, 1986.

Hanlin, R.T., and M. Ulloa. Atlas of Introductory Mycology, 2nd ed. Winston-Salem, MA: Hunter Textbooks Inc., 1978.

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Fungi

Fungi

Fungi (plural of fungus) are one of the five kingdoms of organisms. Kingdoms are the main divisions into which scientists classify all living things on Earth. The other kingdoms are: Monera (single-celled organisms without nuclei), Protista (single-celled organisms with a nucleus), Plantae (plants), and Animalia (animals).

Fungi constitute a large and diverse group of organisms. The kingdom of fungi is divided into four major groups: conjugating fungi, sac fungi, club fungi, and imperfect fungi. Mushrooms, molds, yeasts, and mildew are all fungi. Biologists have estimated that there are more than 200,000 species of fungi in nature, although only about 100,000 have been identified so far. The scientific study of fungi is called mycology.

General characteristics

The different groups of fungi have different levels of cellular organization. Some groups consist of single-celled organisms that have a single nucleus per cell. (A nucleus is a membrane-enclosed structure within a cell that contains the cell's genetic material and controls its growth and reproduction.) Other groups consist of single-celled organisms in which each cell has hundreds or thousands of nuclei. Still others consist of multicellular organisms that have one or two nuclei per cell. The bodies of multicellular fungi usually consist of slender, cottony filaments called hyphae. A mass of hyphae is called a mycelium. The mycelium carries on all the life-maintaining processes of the organism, including sexual reproduction (in most species).

Unlike plants, fungi do not contain chlorophyll (green pigment) and thus cannot create their own food through photosynthesis (the chemical process by which plants containing chlorophyll use sunlight to convert carbon dioxide and water to carbohydrates, releasing oxygen as a byproduct).

Most species of fungi grow on land and obtain their nutrients from dead organic matter. Most species feed by secreting enzymes, which partially break down the food. The fungi then absorb the partially digested food to complete digestion internally. Because fungi (along with bacteria) help decompose dead plants, animals, and other organic matter, they serve an important ecological role. They release large amounts of carbon dioxide into the atmosphere and recycle nitrogen and other important nutrients for use by plants and other organisms.

Some fungi are parasites, living in or on another organism (called a host) from which they obtain their nutrients. This relationship usually harms the host. Such parasitic fungi usually have specialized tissues called haustoria that penetrate the host's body. Most of the diseases that afflict agricultural plants are caused by parasitic fungi. Some examples are corn smut, black stem rust of wheat and barley, and cotton root rot. Some species of fungi also can parasitize animals. Fungi that parasitize humans cause diseases such as athlete's foot, ringworm, and yeast infections.

Words to Know

Carbohydrate: A compound consisting of carbon, hydrogen, and oxygen found in plants and used as a food by humans and other animals.

Hyphae: Slender, cottony filaments making up the body of multicellular fungi.

Nucleus: Membrane-enclosed structure within a cell that contains the cell's genetic material and controls its growth and reproduction.

Parasite: Organism living in or on another organism (called a host) from which it obtains nutrients.

Photosynthesis: Chemical process by which plants containing chlorophyll use sunlight to convert carbon dioxide and water to carbohydrates, releasing oxygen as a by-product.

Symbiosis: Close relationship between two organisms of different species, which often benefits each member.

Conjugating fungi

There are about 600 species of conjugating fungi. Most species are land-based and feed on organic matter, although there are a few parasitic species. The algaelike conjugating fungi have a continuous mycelium containing hundreds or thousands of nuclei, with no divisions between them. Species of conjugating fungi cause potato blight, downy mildew, black bread mold, and water mold (which affects dead leaves and sticks in water).

Sac fungi

Sac fungi are so-named because many species in this group reproduce sexually by forming a spore-filled structure called an ascus, which means literally "a sac." This large group of fungi includes many species

that are beneficial to humans. For example, yeasts are a major group of sac fungi. Different yeasts are used by bakers, brewers, and vintners to make their bread, beer, or wine. Truffles, regarded as a food delicacy, are underground sac fungi that grow in association with tree roots.

Some species of sac fungi appear as blue-green molds on fruits, vegetables, and cheeses. Several other species are important for the making of cheeses, such as blue cheese.

Some other sac fungi cause plant diseases. These include chestnut blight (a disease that virtually wiped out the American chestnut as a mature forest tree) and Dutch elm disease.

Lichens

A lichen is the product of a symbiotic (mutually beneficial) relationship between fungi and blue-green or green algae. The resulting structure resembles neither species. Typically, the algae supply carbohydrates to the fungi and the fungi supply nitrogen and other nutrients to the algae. Lichens can be very colorful, ranging from bright reds and oranges to yellows and greens, with white, gray, and black hues.

Many lichens can inhabit harsh environments and withstand prolonged periods of drought. In the temperate region of North America, lichens often grow on tree trunks and bare rocks and soil. In Antarctica, they have been found growing upon and within rocks. In the Arctic, the lichen species commonly known as reindeer mosses are important in the diets of caribou and reindeer.

Club fungi

Club fungi species reproduce sexually by forming spores on top of club-shaped structures called basidia. The club fungi are believed to be closely related to the sac fungi. This large group includes species that are known as mushrooms, toadstools, earthstars, stinkhorns, puffballs, jelly fungi, coral fungi, and many other interesting names. Some species, such as the rusts and smuts, cause disease in agricultural grains. Other species, such as the fly agaric, produce chemical hallucinogens (chemicals that induce visions) and have been used by numerous cultures in their religious ceremonies.

A significant species of club fungi is called mycorrhizae, which means "fungus root." Mycorrhizal fungus form a symbiotic relationship with many types of plant roots. (Symbiosis is the close association between two organisms of different species, which often benefits each member.) The fungus typically supplies nitrogen-containing compounds to the plant, and the plant supplies carbohydrates and other organic compounds to the fungus. Mycorrhizal fungus are very important for the growth of orchids and many trees, including pines and beeches.

Imperfect fungi

Mycologists have never observed the sexual reproduction of fungi in the imperfect fungi group. Since this part of their life cycle is missing, they are referred to as imperfect fungi. These fungi may have lost their sexual phase through the course of evolution. Species in this group produce plant and animal diseases. Athlete's foot and ringworm in humans are caused by imperfect fungi.

Some species in this group appear as blue-green molds on fruits, vegetables, and cheeses. Several other species are important for the making of cheeses such as blue cheese, Roquefort, and Camembert. Certainly the best known product obtained from this group of fungi is penicillin, the first widely used antibiotic. Penicillin was first discovered in the mold Penicillium notatum by Scottish bacteriologist Alexander Fleming (18811955) in 1928. Scientists now know it is produced by other species in this group, as well.

[See also Fermentation; Hallucinogens; Parasite; Yeast ]

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Fungi

Fungi (fŭn´jī), kingdom of heterotrophic single-celled, multinucleated, or multicellular organisms, including yeasts, molds, and mushrooms. The organisms live as parasites, symbionts, or saprobes (see saprophyte). Previously classified in the plant kingdom, fungi are nonmotile, like plants, but lack the vascular tissues (phloem and xylem) that form the true roots, stems, and leaves of plants. Most coenocytic (multinucleated) or multicelluar fungi are composed of multiple filaments, called hyphae, grouped together into a discrete organism called a mycelium. The cell walls of most fungi are of chitin compounds instead of cellulose; a group fungi known as cryptomycota lack chitinous cell walls. In many ways fungi are more closely related to animals than to plants, and they have been thought to share a common protist ancestor with animals. A recent classification system suggested by nucleic acid (genetic material) comparisons places the fungi with the animals and the plants in an overarching taxonomic group called the eukarya.

Most fungi are capable of asexual and sexual reproduction. Asexual reproduction is by fragmentation or spore formation. Those that reproduce sexually produce gametes in specialized areas of the hyphae called gametangia. The gametes may be released to fuse into spores elsewhere, or the gametangia themselves may fuse. In some cases dikaryons [di = two, karyo = nucleus], which are found only among fungi, result when unspecialized hyphae fuse but their nuclei remain distinct for part of the life cycle.

Unlike algae or plants, fungi lack the chlorophyll necessary for photosynthesis and must therefore live as parasites or saprobes (see parasite). Typically they release digestive enzymes onto a food source, partially dissolving it to make the necessary organic or inorganic nutrients available. Some parasitic types obtain their food directly from the cells of a living food source. Some types of fungi are involved in symbiotic relationships, for example, lichens (a combination of a fungus and a green alga or a cyanobacterium) and the mycorrhizae (symbiosis between a fungus and the roots of a vascular plant).

Some fungi are pathogenic to humans and other animals. Such diseases are called mycoses or fungal infections. Some molds, in particular, release toxic chemicals called mycotoxins that can result in poisoning or death. Various fungi can also cause serious damage to fruit harvests and other crops (see diseases of plants).

Types of Fungi

The 100,000 identified species of organisms commonly classed together as fungi are customarily divided into four phyla, or divisions: Zygomycota, Ascomycota, Basidiomycota, and Deuteromycota.

Zygomycota includes black bread mold and molds, such as those of the genus Glomus, that form important symbiotic relationships with plants. Most are soil-living saprobes that feed on dead animal or plant remains. Some are parasitic of plants or insects. They reproduce sexually and form tough zygospores from the fusion of neighboring gametangia. There is no distinguishable male or female.

Ascomycota includes yeasts, the powdery mildews, the black and blue-green molds, edible types such as the morel and the truffle, and species that cause such diseases of plants as Dutch elm disease, chestnut blight, apple scab, and ergot. There are over 50,000 species, about 25,000 of which occur only in lichens. In ascomycetes, the hyphae are subdivided by porous walls through which the cytoplasm and the nuclei can pass. Their life cycle is a complex combination of sexual and asexual reproduction.

Basidiomycota includes the gill fungi (most mushrooms), the pore fungi (e.g., the bracket fungi, which grow shelflike on trees, and an edible type called tuckahoe), and the puffballs. It also includes the fungi that cause smut and rust in plants. Like ascomycetes, the hyphae are subdivided by porous walls. In basidiomycetes, two hyphae fuse to form a dikaryotic mycelium (a mycelium in which both nuclei remain distinct). These mycelia differentiate into reproductive structures called basidia that make up the basidiocarp (the body popularly known as the mushroom cap). The nuclei then fuse and undergo meiosis, creating spores with one nucleus each. When these spores germinate, they produce hyphae, and the process begins again.

Deuteromycota comprises a miscellaneous assortment of fungi that do not not fit neatly in other divisions; they have in common an apparent lack of sexual reproductive features. Also called Fungi Imperfecti, the group includes species that help create Roquefort and Camembert cheeses, that cause diseases of plants and of animals (e.g., athlete's foot and ringworm), and that produce penicillin. A number of the fungi classified as deuteromycetes have been found to be asexual stages of species in other groups, and some classification schemes consider the deuteromycetes a class under Ascomycota.

Usefulness of Fungi

Fungi are valuable economically as a source of antibiotics, of vitamins, and of various industrially important chemicals, such as alcohols, acetone, and enzymes, as well as for their role in fermentation processes, as in the production of alcoholic beverages, vinegar, cheese, and bread dough. They are extremely important in soil renewal, through the decomposition of organic matter (see humus)—a function unwelcome when it results in the rotting of clothing and other goods and the spoilage of foods.

Bibliography

See C. M. Christensen, The Molds and Man (3d. rev. ed. 1965); J. Webster, Introduction to Fungi (1980); B. Kendrick, The Fifth Kingdom (1985); A. Chandra, Elsevier's Dictionary of Edible Mushrooms (1989); C. T. Ingold and H. J. Hudson, The Biology of Fungi (6th ed. 1993); G. W. Hudler, Magical Mushrooms, Mischievous Molds (1998); P. Roberts and S. Evans, The Book of Fungi (2011).

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Fungi

Fungi

Fungi play an essential role in breaking down organic matter and thereby allowing nutrients to be recycled in nature. As such, they are important decomposers and without them living communities would become buried in their own waste. Some fungi, the saprobes, get their nutrients from nonliving organic matter, such as dead plants and animal wastes, clothing, paper, leather, and other materials. Others, the parasites , get nutrients from the tissues of living organisms. Both types of fungi obtain nutrients by secreting enzymes from their cells that break down large organic molecules into smaller components. The fungi cells can then absorb the nutrients.

Although the term fungus invokes unpleasant images for some people, fungi are a source of antibiotics , vitamins, and industrial chemicals. Yeast , a kind of fungi, is used to ferment bread and alcoholic beverages. Nevertheless, fungi also cause athlete's foot, yeast infections, food spoilage, wheat and corn diseases, and, perhaps most well known, the Irish potato famine of 18431847 (caused by the fungus Phytophthora infestans ), which contributed to the deaths of 250,000 people in Ireland.

Fungi are not plants, and are unique and separate forms of life that are classified in their own kingdom. Approximately 75,000 species of fungi have been described, and scientists estimate that more than 90% of all fungi species on the planet have yet to be discovered. The fungi body, called mycelium , is composed of threadlike filaments called hyphae . All fungi can reproduce asexually by cell division, budding, fragmentation, or spores, although some reproduce sexually.

The main groups of fungi are chytrids, water molds, zygosporangium-forming fungi, sac fungi, and club fungi. Chyrids live in muddy or aquatic habitats and feed on decaying plants, though some live as parasites on living plants, animals, and other fungi. Water molds, distantly related to other fungi, play an important role as decomposers in aquatic habitats. Some, however, live as parasites on aquatic animals and terrestrial plants, including potato plants that can be destroyed by certain types of water molds. Zygosporangium-forming fungi also can be either saprobes, such as the well-known black bread mold , or parasites on insects, such as houseflies. Sac fungi, of which more than 30,000 species are known, include the yeast used to leaven bread and alcoholic beverages. However, many of these fungi also cause diseases in plants. Club fungi, numbering more than 25,000 species, include mushrooms, stinkhorns, and puffballs. While some fingi are edible, others produce deadly poisons.

See also Candidiasis; Chitin; Fermentation; Fungal genetics; History of the development of antibiotics; Lichens; Winemaking

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fungi

fungi Subdivision of Thallophyta, plants without differentiation into root, stem, and leaf; they cannot photosynthesize, and all are parasites or saprophytes. Microfungi are moulds, as opposed to larger fungi, which are mushrooms and toadstools. Yeasts are sometimes classed with fungi.

Species of moulds such as Penicillium, Aspergillus, etc., are important causes of food spoilage in the presence of oxygen and relatively high humidity. Those that produce toxins (mycotoxins) are especially problematical. On the other hand species of Penicillium such as P. cambertii and P. roquefortii are desirable and essential in the ripening of certain cheeses.

A number of larger fungi (mushrooms) are cultivated, and other wild species are harvested for their delicate flavour. The mycelium of smaller fungi (including Graphium, Fusarium, and Rhizopus species) are grown commercially on waste carbohydrate as a rich source of protein for food manufacture. See mycoprotein.

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DAVID A. BENDER. "fungi." A Dictionary of Food and Nutrition. 2005. Encyclopedia.com. 28 Sep. 2016 <http://www.encyclopedia.com>.

DAVID A. BENDER. "fungi." A Dictionary of Food and Nutrition. 2005. Encyclopedia.com. (September 28, 2016). http://www.encyclopedia.com/doc/1O39-fungi.html

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Fungi

Fungi

Mycology is the study of fungi (mykes, Greek for "fungi," and ology, meaning "study of"). Most contemporary mycologists consider the fungi to be in two kingdoms: kingdom Fungi with five phyla and kingdom Stramenopila with three phyla. The total number of fungi in the world is estimated to be over 1.5 million with less than 5 percent of the species described. Some mycologists believe that the total number of fungi may be more than 2 million. Two other kingdoms are sometimes mistaken for fungi: the slime molds (kingdom Myxomycota), which have a creeping plasmodium, and the bacteria and actinomycetes (kingdom Monera).

Structure and Life Cycle

Fungi are nonphotosynthetic, lacking the chlorophyll of higher plants and algae, and are recognized by their fruiting bodies, which is the visible part of the fungus. Examples include mushrooms, puffballs, molds, cup fungi, and morels. The vegetative structure consists of minute filamentous cells called hyphae, which are microscopic in size, usually from 1 micron to 10 microns in diameter. An aggregate of hyphae is called a mycelium, which is the thallus or vegetative part of the fungus plant known as spawn in the mushroom industry. In the kingdom Fungi, the mycelium has one haploid nucleus per cell (only one set of chromosomes) or is dikaryotic (two haploid nuclei per cell). In contrast, in the kingdom Stramenopila, mycelium has diploid nuclei (one nucleus with chromosomes from both parents). In both kingdoms, the mycelium has rigid cell walls usually composed of chitin (a complex carbon compound ), although it is infrequently made up of cellulose in kingdom Fungi.

In both kingdoms, fungi obtain their nutrition by excreting enzymes into the host or any organic material, which is then broken down and absorbed into the hyphal cell to provide the nutrition necessary for growth. Fungi function in the ecosystem as saprophytes, or decomposers. They break down dead organic matter as parasites by attacking living hosts or host cells, and as mycorrhizae (mycor, meaning "fungi," and rhizae, meaning "root") by forming jointly beneficial unions with the roots of higher plants. Fungi and algae combine to form a plant called a lichen. Only fungi and bacteria decompose various kinds of organic matter and change complex organic structures, such as plant cell walls containing lignin or the chitinous exoskeletons of insects, into simple carbohydrates that can then be assimilated by a wide variety of organisms.

The hyphae grow until they form an extensive mycelium of fungal tissue. At this point a young fruiting body initial (or button) begins to form and develops into a mature fruiting body. In some phyla fruiting bodies are large and variously recognized as mushrooms, boletes, puffballs, conks, cup fungi, morels, false morels, truffles, and witches' butter, to mention only a few. However, many of the aquatic fungi, molds, and other fungi (such as the yeasts) form minute fruiting structures that can only be seen with the aid of a magnifying glass or a microscope.

The function of the fruiting body is to form a tissue in or on which the spore-bearing surface is formed. The spore-bearing surface covers the gills of a mushroom, is inside the tubes of the bolete, or forms a spore mass inside the puffball and truffle. The spore of the fungus serves the same purpose as the seed of the green plants, but the spore is composed of only one or several simple cells. The spore forms following meiosis in sexual cells located in the spore-bearing surface. In the mushrooms, boletes, cup fungi, and morels, for example, the nearly mature spores are forcibly discharged at maturity from the spore-bearing surface. If one blows over the surface of a cup fungus at maturity, a small cloud (the puffing or a discharge of the spores) can be seen. However, in other fungi such as the puffballs, stinkhorns, and truffles, no forcible discharge occurs. The powdery spore mass of the puffball is often discharged through a pore in the top that forms at maturity. The greenish-gray spore mass of the stinkhorn emits a strong odor, which attracts insects that eat, contact, and spread the spores. The truffle, which is found at the surface of or beneath the soil, gradually matures and produces strong smells that attract small rodents that dig up and eat the fruiting bodies and distribute the spores.

Molds, such as Penicillium, produce microscopic asexual fruiting bodies that in turn produce asexual spores called conidia on structures known as conidiophores. Some yeast cells bud and reproduce asexually. Other fungi, such as the bread mold Rhizopus, produce asexual fruiting structures known as sporangiophores that support sacs called sporangia in which asexual spores are produced. Aquatic fungi also produce a variety of asexual spores, some of which are motile (called zoospores ). These spores swim to a potential host, retract their flagella , and enter the host producing an oval fruiting body with a feeding tube or minute root-like rhizoids. The zoospores of the kingdom Fungi have one whiplash flagellum, while in the kingdom Stramenopila the zoospores have two flagella, one whiplash and one tinsel type, that move rapidly to propel the zoospore. Spores, either sexual or asexual, motile or nonmotile, usually germinate to form thin cylindric hyphal cells that rapidly elongate and branch to form the mycelium of the new fungus plant.

Nutrition

The fungus cell must grow into the host plant or a bit of organic material in order to gain nutrition from it. This is achieved by discharging enzymes (called exoenzymes) from the cells. Complex carbohydrates and proteins are broken down by this process and then are absorbed by the hyphae. The nutrients can then be translocated from one cell to another. The growth of most fungi is indeterminate (that is, it never stops) because the fungus must continue to grow into new areas to seek new sources of food. The typical fairy ring represents a visible bright green grass ring where the active mycelium is, and it is along this ring that the mushrooms will fruit. Each year the diameter of the ring will increase while the mycelium dies out in the middle because the food base is exhausted.

Mycorrhizae

Mycorrhizal fungi invade the healthy outer cells of the tiny rootlets of higher plants. Ectomycorrhizae surround the rootlet with a sheath of fungal cells, and special hyphae penetrate between the cortical cells of the root-let and exchange nutrients with the higher plant, usually a tree or a shrub. Endomycorrhizae called VA (vesicular arbuscular) mycorrhizae form oval storage cells (vesicles) and minute branchlike processes (arbuscules) in the root cells of the host where nutrients are exchanged. Because fungi do not carry out photosynthesis and cannot make their own sugar, the mycorrhizal fungus obtains moisture and carbohydrates from its green plant host and, in return, provides the host with nitrogen, phosphorus, zinc, and other essential compounds. It does this using the miles of tiny mycelium to successfully compete for phosphorus and nitrogen, which extends the root system of the green plant. Most of the woody plants such as the pine, oak, birch, and beech have ectomycorrhizae, and most herbaceous plants such as grass, corn, wheat, and rye have VA endomycorrhizae.

Food, Drugs, and Poisons

Fungi play a major role in the diet of humans. Yeasts (Saccaromyces cerevisiae ) are used in the process of fermentation, in which they break down carbohydrates to liberate carbon dioxide and to produce alcohol. Gin is made when juniper berries are fermented, wine from grapes, beer from grains, bourbon from corn, and scotch from barley. Yeasts are also used in making Limburger cheese, yogurt, and Kombucha tea. Baker's yeast produces a high proportion of CO2, which causes the dough to rise. Molds, generally species of Penicillium, are used to produce cheese such as blue, Roquefort, and Camembert.

The new age of antibiotics was ushered in with Sir Alexander Fleming's discovery of penicillin in 1929. It was first produced by the blue-green mold Penicillium notatum. Many other antibiotics are produced from Actinomycetes. On the other hand, aflatoxins produced by species of Aspergillus cause food spoilage and are carcinogenic. Mushrooms also produce toxins that only affect humans when they are eaten. Examples of these are the amatoxins and phallotoxins produced by a mushroom, Amanita virosa, that are often fatal to humans; muscarine and muscimol produced by the fly agaric, Amanita muscaria, are usually not fatal. Hallucinogens such as psilocybin and psilocin are produced by several species of mushrooms including Psilocybe cubensis and the protoplasmic poison monomethyhydrozine (MMH) by the false morel Gyromitra esculenta.

Fungal Diseases

Fungi that are parasitic on humans include the common dermatophytes on the skin, hair, and nails, causing such diseases as barber's itch and athlete's foot (Microsporium canis ). More serious diseases, such as Histoplasma capsulatum or histoplasmosis found in warm temperate climates and coccidiomycosis (Coccidioides immitis ) in arid areas, grow in bird dung and soil, producing a respiratory infection in humans that is occasionally fatal. North and South American blastomycosis, sporotrichosis, and other diseases caused by fungi attack tissues and organs within the body and are incapacitating or fatal to their victims.

Diseases that affect major economic plants have historically impacted people. The ergot (Claviceps purpurea ), which infects the grains of rye, produces deadly brown specks in bread and led to deformity and the death of thousands of people in the Middle Ages. The European grape was saved from the grips of the downy mildew (Plasmopara viticola) in the 1800s by the discovery of Bordeaux Mixture (copper sulfate and lime); the discovery gave birth to plant pathology as a science. The European potato famine, caused by the potato blight fungus (Phytophthora infestans ), in the years 1845 to 1847 forced more than a million Irish to flee from Ireland. In the United States, the chestnut blight (Cryphonectria parasitica ) has reduced the tall and highly valued American chestnut from the eastern forests to a rare shrub, while the Dutch elm disease (Ceratocystis ulmi ) threatens to eliminate the American elm. Scientists struggle continually to produce resistant strains of wheat that will not be parasitized by the wheat rust (Phytophthora infestans ) and corn that will be resistant to the corn smut (Ustilago maydis ). Mexicans and Hispanic Americans cook the infected ears in many ways and consider them to be a delicacy.

The shelves of every supermarket have the meadow mushroom (Agaricus bisporus ) and specialty mushrooms like Shiitake (Lentinus edodes ), oyster shell (Pleurotus ostreatus ), and the Portabello (Agaricus sp.) for sale. In fact, the leading agricultural crop in Pennsylvania is mushrooms.

see also Chestnut Blight; Dutch Elm Disease; Interactions, Plant-Fungal; Lichen; Mycorrhizae; Pathogens; Plant Systematics; Potato Blight; Taxonomy; Taxonomy, History of.

Orson K. Miller Jr.

Bibliography

Alexopoulos, C. J., C. W. Mims, and M. Blackwell. Introductory Mycology. New York:John Wiley & Sons, 1996.

Kavaler, L. Mushrooms Molds and Miracles. New York: The New American Library, 1965.

Large, E. C. The Advance of the Fungi. New York: Henry Holt & Co., 1940.

Miller, O. K. Mushrooms of North America. New York: E. P. Dutton Inc., 1973.

Rolfe, R. T. and F. W. Rolfe. The Romance of the Fungus World. New York: Dover Publications Inc., 1925.

Schaechter, E. In the Company of Mushrooms. Cambridge, MA: Harvard University Press, 1997.

Stamets, P. Growing Gourmet & Medicinal Mushrooms. Berkeley, CA: Ten Speed Press,1993.

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fungi

fungi A group of organisms formerly regarded as simple plants lacking chlorophyll but now classified in a separate kingdom, Fungi. They can either exist as single cells or make up a multicellular body called a mycelium, which consists of filaments known as hyphae. Most fungal cells are multinucleate and have cell walls composed chiefly of chitin. Fungi exist primarily in damp situations on land and, because of the absence of chlorophyll, are either parasites or saprotrophs on other organisms. The principal criteria used in classification are the nature of the spores produced and the presence or absence of cross walls within the hyphae (see Ascomycota; Basidiomycota; Deuteromycota; Zygomycota). See also lichens.

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Fungi

Fungi The taxonomic kingdom that comprises eukaryotic, non-photosynthetic (see photosynthesis) organisms, which obtain nutrients by absorbing organic compounds from their surroundings. Fungi may be unicellular, filamentous (see mycelium), or plasmodial (i.e. forming an acellular, mobile feeding structure consisting of a mass of naked protoplasm with many nuclei), and most have cell walls containing chitin. Many fungi live as saprotophs and are important agents of organic decomposition. Others live as symbionts or parasites (see parasitism). Some can cause disease in plants or animals. Fossils are rare, but fungi are believed to have left the sea about 400 Ma ago, when the first plants colonized dry land.

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MICHAEL ALLABY. "Fungi." A Dictionary of Ecology. 2004. Encyclopedia.com. 28 Sep. 2016 <http://www.encyclopedia.com>.

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Fungi

Fungi One of the taxonomic kingdoms, comprising eukaryotic, non-photosynthetic organisms, which obtain nutrients by the absorption of organic compounds from their surroundings. Fungi usually have chitin-containing cell walls and may be unicellular, filamentous (mycelial), or plasmodial. They may live saprotrophically, symbiotically, parasitically, etc. Some can cause disease in plants or animals, including humans. Distribution is cosmopolitan. As fungi generally lack hard parts, they are rarely found as fossils, but possible thread-like representatives have been found in Precambrian rocks. They probably left the sea about 400 million years ago, when the first plants colonized the land.

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Fungi

Fungi One of the three multicellular kingdoms, along with the Plantae (plants) and Animalia (animals). Although resembling plants, Fungi feed by ingesting organic matter, whereas plants are autotrophic and require only inorganic substances as nutrients. As fungi generally lack hard parts they are rarely found as fossils, but thread-like representatives have been found in Precambrian rocks. They probably left the sea about 400 million years ago, when the first plants colonized the land.

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fungi

fun·gi / ˈfənˌjī; -ˌgī/ • plural form of fungus.

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fungi

fungi •Haggai • Belgae • gilgai • fungi •sarcophagi • mamaguy • assegai

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