Automated Alphabet Reduction for Protein Datasets.(Research article)(Report)

BMC Bioinformatics | January 6, 2009| | Copyright

Authors: Jaume Bacardit (corresponding author) [1,2]; Michael Stout [1,2]; Jonathan D Hirst [3]; Alfonso Valencia [4]; Robert E Smith [5]; Natalio Krasnogor (corresponding author) [1]

Background

The prediction of the 3D structure of protein chains, known as Protein Structure Prediction (PSP), is a key challenge in structural bioinformatics. Not only there is a lack of consensus on how to approach PSP, but for some of the current methods, especially ab-initio ones, computations are exceedingly demanding. Rosetta@home [1], one of the top predictors in the ...

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